AgiMicroRna

DOI: 10.18129/B9.bioc.AgiMicroRna    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see AgiMicroRna.

Processing and Differential Expression Analysis of Agilent microRNA chips

Bioconductor version: 3.12

Processing and Analysis of Agilent microRNA data

Author: Pedro Lopez-Romero <plopez at cnic.es>

Maintainer: Pedro Lopez-Romero <plopez at cnic.es>

Citation (from within R, enter citation("AgiMicroRna")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AgiMicroRna")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AgiMicroRna")

 

PDF R Script AgiMicroRna
PDF   Reference Manual

Details

biocViews AgilentChip, DifferentialExpression, Microarray, OneChannel, Preprocessing, Software
Version 2.40.0
In Bioconductor since BioC 2.5 (R-2.10) (11.5 years)
License GPL-3
Depends R (>= 2.10), methods, Biobase, limma, affy(>= 1.22), preprocessCore, affycoretools
Imports Biobase
LinkingTo
Suggests geneplotter, marray, gplots, gtools, gdata, codelink
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AgiMicroRna_2.40.0.tar.gz
Windows Binary AgiMicroRna_2.40.0.zip
macOS 10.13 (High Sierra) AgiMicroRna_2.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/AgiMicroRna
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/AgiMicroRna
Package Short Url https://bioconductor.org/packages/AgiMicroRna/
Package Downloads Report Download Stats

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