.ks_enrichment {hypeR} | R Documentation |
Enrichment test via one-sided Kolmogorov–Smirnov test
.ks_enrichment( signature, genesets, weights = NULL, weights.pwr = 1, absolute = FALSE, plotting = TRUE )
signature |
A vector of ranked symbols |
genesets |
A list of genesets |
weights |
Weights for weighted score (Subramanian et al.) |
weights.pwr |
Exponent for weights (Subramanian et al.) |
absolute |
Takes max-min score rather than the max deviation from null |
plotting |
Use true to generate plot |
A list of data and plots