ModDNASequenceTrack {RNAmodR}R Documentation

ModDNASequenceTrack

Description

A Gviz compatible SequenceTrack for showing modified DNA sequences.

Usage

ModDNASequenceTrack(sequence, chromosome, genome, ...)

Arguments

sequence

A character vector or ModDNAString object of length one. The sequence to display. See SequenceTrack.

chromosome, genome, ...

See SequenceTrack.

Value

a ModDNASequenceTrack object

Examples

seq <- ModDNAStringSet(c(chr1 = paste0(alphabet(ModDNAString()),collapse = "")))
st <- ModDNASequenceTrack(seq)
Gviz::plotTracks(st, chromosome = "chr1",from = 1L, to = 20L)

[Package RNAmodR version 1.0.2 Index]