To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("encoDnaseI")

In most cases, you don't need to download the package archive at all.

encoDnaseI

 

data provided by UCSC for Cd4 raw measures of DnaseI hypersensitivity

Bioconductor version: Release (3.1)

data provided by UCSC for Cd4 raw measures of DnaseI hypersensitivity

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("encoDnaseI")):

Installation

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("encoDnaseI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("encoDnaseI")

 

PDF R Script ENCODE/hg18 track demo: DNaseI hypersensitivity
PDF   Reference Manual

Details

biocViews ENCODE, ExperimentData, Genome, Homo_sapiens_Data, SNPData
Version 0.6.0
License Artistic-2.0
Depends R (>= 2.15.0), methods, Biobase(>= 2.5.5), lattice, GGtools, GGBase
Imports
LinkingTo
Suggests GGdata
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source encoDnaseI_0.6.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/encoDnaseI/
Package Downloads Report Download Stats

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