To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("HiCDataLymphoblast")

In most cases, you don't need to download the package archive at all.

HiCDataLymphoblast

Human lymphoblastoid HiC data from Lieberman-Aiden et al. 2009

Bioconductor version: Release (3.1)

The HiC data from human lymphoblastoid cell line (HindIII restriction) was retrieved from the sequence read archive and two ends of the paired reads were aligned separately with bowtie.

Author: Borbala Mifsud

Maintainer: Borbala Mifsud <Borbala.Mifsud at cancer.org.uk>

Citation (from within R, enter citation("HiCDataLymphoblast")):

Installation

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("HiCDataLymphoblast")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HiCDataLymphoblast")

PDF		package_vignettes.pdf
PDF		Reference Manual

Details

biocViews	ExperimentData, Homo_sapiens_Data
Version	1.4.0
License	GPL-3
Depends
Imports
LinkingTo
Suggests	GOTHiC, ShortRead
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	GOTHiC
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	HiCDataLymphoblast_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Package Short Url	http://bioconductor.org/packages/HiCDataLymphoblast/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

Package vignettes and manuals.
Workflows for learning and use.
Course and conference material.
Videos.
Community resources and tutorials.

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Support site - for questions about Bioconductor packages
Bioc-devel mailing list - for package developers