To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene")

In most cases, you don't need to download the package archive at all.

TxDb.Hsapiens.UCSC.hg19.knownGene

Annotation package for TxDb object(s)

Bioconductor version: Release (3.1)

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("TxDb.Hsapiens.UCSC.hg19.knownGene")):

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene")


PDF		Reference Manual

biocViews	AnnotationData, Genetics, Homo_sapiens, TxDb
Version	3.1.2
License	Artistic-2.0
Depends	GenomicFeatures(>= 1.19.32)
Imports	GenomicFeatures, AnnotationDbi
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	cgdv17, chimera, FDb.InfiniumMethylation.hg19, FunciSNP, Homo.sapiens
Imports Me	ChIPseeker
Suggests Me	AllelicImbalance, AnnotationDbi, beadarray, biomvRCNS, biovizBase, BSgenome.Hsapiens.UCSC.hg19, bumphunter, ChIPpeakAnno, ChIPQC, cpvSNP, CRISPRseek, derfinder, derfinderPlot, gage, GenomicAlignments, GenomicFeatures, GenomicRanges, GenoView, ggbio, gmapR, GoogleGenomics, groHMM, HTSeqGenie, InPAS, methyAnalysis, R3CPET, regionReport, rtracklayer, SGSeq, SigFuge, SplicingGraphs, trackViewer, VariantAnnotation, VariantFiltering

Follow Installation instructions to use this package in your R session.

Package Source	TxDb.Hsapiens.UCSC.hg19.knownGene_3.1.2.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Package Short Url	http://bioconductor.org/packages/TxDb.Hsapiens.UCSC.hg19.knownGene/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: