- Home
- Bioconductor 3.1
- Software Packages
- netresponse
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("netresponse")
In most cases, you don't need to download the package archive at all.
netresponse
|
|
|
|
|
|
|
Functional Network Analysis
Bioconductor version: Release (3.1)
Algorithms for functional network analysis. Includes an implementation of a variational Dirichlet process Gaussian mixture model for nonparametric mixture modeling.
Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen
Maintainer: Leo Lahti <leo.lahti at iki.fi>
Citation (from within R,
enter citation("netresponse")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("netresponse")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("netresponse")
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | CellBiology, Clustering, DifferentialExpression, GeneExpression, Genetics, GraphAndNetwork, Microarray, Network, Software, Transcription |
| Version | 1.18.0 |
| In Bioconductor since | BioC 2.7 (R-2.12) (5 years) |
| License | GPL (>=2) |
| Depends | R (>= 2.15.1), Rgraphviz, methods, minet, mclust, reshape |
| Imports | dmt, ggplot2, graph, igraph, parallel, plyr, qvalue, RColorBrewer |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/antagomir/netresponse |
| BugReports | https://github.com/antagomir/netresponse/issues |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | netresponse_1.18.0.tar.gz |
| Windows Binary | netresponse_1.18.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | netresponse_1.18.0.tgz |
| Mac OS X 10.9 (Mavericks) | netresponse_1.18.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/netresponse/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/netresponse/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
