To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("ArrayExpress")

In most cases, you don't need to download the package archive at all.

ArrayExpress

Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Bioconductor version: Release (3.1)

Access the ArrayExpress Repository at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Author: Audrey Kauffmann, Ibrahim Emam

Maintainer: Ugis Sarkans <ugis at ebi.ac.uk>

Citation (from within R, enter citation("ArrayExpress")):

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("ArrayExpress")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ArrayExpress")

PDF	R Script	ArrayExpress: Import and convert ArrayExpress data sets into R object
PDF		Reference Manual

biocViews	DataImport, Microarray, OneChannel, Software, TwoChannel
Version	1.28.1
In Bioconductor since	BioC 2.3 (R-2.8) (7 years)
License	Artistic-2.0
Depends	R (>= 2.9.0), Biobase(>= 2.4.0)
Imports	XML, affy, limma
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	DrugVsDisease
Imports Me
Suggests Me	gCMAPWeb, Hiiragi2013
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	ArrayExpress_1.28.1.tar.gz
Windows Binary	ArrayExpress_1.28.1.zip
Mac OS X 10.6 (Snow Leopard)	ArrayExpress_1.28.1.tgz
Mac OS X 10.9 (Mavericks)	ArrayExpress_1.28.1.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/ArrayExpress/tree/release-3.1
Package Short Url	http://bioconductor.org/packages/ArrayExpress/
Package Downloads Report	Download Stats

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