Changes in version 1.3.1 ---------------------------------------------------------------- BUG FIXED * `DAVIDGODag` bug was fixed. Now in case that pvalueCutoff value is lower than every value present an empty goDag is returned (Thanks to Ulrik Stervbo) Changes in version 1.3.0 ---------------------------------------------------------------- MINOR CHANGES * Second bump y in version x.y.z after creating 2.14 release branch. Changes in version 1.2.0 ---------------------------------------------------------------- MINOR CHANGES * First bump y in version x.y.z prior creating 2.14 branch. Changes in version 1.1.4 ---------------------------------------------------------------- BUG FIXED * `getFunctionalAnnotationChartFile` bug was fixed. Now threshold and count parameter works as supposed (Thanks to Ulrik Stervbo) Changes in version 1.1.3 ---------------------------------------------------------------- MINOR CHANGES * Added again into the repository. Changes in version 1.1.2 ---------------------------------------------------------------- CODE CHANGES * In setAs(from="data.frame", to="DAVIDFunctionalAnnotationChart") function PValue field force to numeric data type (thanks to Marc Carlson) NEW FEATURES * Apache Axis time out parameter modification set/getTimeOut * Apache Axis http protocol version parameter modification set/getHttpProtocolVersion DOCUMENTATION * Vignette Trouble shooting section added with apache axis parameter examples. Changes in version 1.1.1 ---------------------------------------------------------------- DOCUMENTATION * CITATION file was included. * Minor updates to DAVIDWebService-class and DAVIDWebService-package man pages and Roxygen2 quotes, in order to include the article citation. * Vignette email parameter invocation corrected. CODE CHANGES * DAVIDWebService initialize email parameter order modification (email, ..., url) DEPENDENCY CHANGES * Category, GO.db, RBGL and rJava packages were moved to import. * NAMESPACE file updated accordingly. Changes in version 1.1.0 ---------------------------------------------------------------- MINOR CHANGES * Bump y in version x.y.z to odd number in 2.14 devel Changes in version 1.0.0 ---------------------------------------------------------------- MINOR CHANGES * fix NEWS formatting * bump y of x.y.z version number for BioC 2.13 release Changes in version 0.99.1 ---------------------------------------------------------------- MINOR CHANGES * `dontrun` tags have been removed from plotting examples (Thanks to Valerie Obenchain). Changes in version 0.99.0 ---------------------------------------------------------------- DOCUMENTATION * `NEWS` file was added.