To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("spkTools")

In most cases, you don't need to download the package archive at all.

spkTools

Methods for Spike-in Arrays

Bioconductor version: 3.0

The package contains functions that can be used to compare expression measures on different array platforms.

Author: Matthew N McCall <mmccall at jhsph.edu>, Rafael A Irizarry <rafa at jhu.edu>

Maintainer: Matthew N McCall <mmccall at jhsph.edu>

Citation (from within R, enter citation("spkTools")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("spkTools")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("spkTools")

 

PDF R Script spkTools: Spike-in Data Analysis and Visualization
PDF   Reference Manual

Details

biocViews Microarray, Software, Technology
Version 1.22.0
In Bioconductor since BioC 2.4 (R-2.9)
License GPL (>= 2)
Depends R (>= 2.7.0), Biobase(>= 2.5.5)
Imports Biobase(>= 2.5.5), graphics, grDevices, gtools, methods, RColorBrewer, stats, utils
LinkingTo
Suggests xtable
SystemRequirements
Enhances
URL http://bioconductor.org
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source spkTools_1.22.0.tar.gz
Windows Binary spkTools_1.22.0.zip
Mac OS X 10.6 (Snow Leopard) spkTools_1.22.0.tgz
Mac OS X 10.9 (Mavericks) spkTools_1.22.0.tgz
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