To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ScISI")

In most cases, you don't need to download the package archive at all.

ScISI

In Silico Interactome

Bioconductor version: 3.0

Package to create In Silico Interactomes

Author: Tony Chiang <tchiang at fhcrc.org>

Maintainer: Tony Chiang <tchiang at fhcrc.org>

Citation (from within R, enter citation("ScISI")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ScISI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ScISI")

 

PDF R Script ScISI Vignette
PDF   Reference Manual

Details

biocViews DecisionTree, GraphAndNetwork, NetworkInference, Proteomics, Software
Version 1.38.0
In Bioconductor since BioC 1.8 (R-2.3)
License LGPL
Depends R (>= 2.10), GO.db, RpsiXML, annotate, apComplex
Imports AnnotationDbi, GO.db, RpsiXML, annotate, methods, org.Sc.sgd.db, utils
LinkingTo
Suggests ppiData, xtable
SystemRequirements
Enhances
URL
Depends On Me PCpheno, ppiStats, SLGI
Imports Me PCpheno, SLGI
Suggests Me RpsiXML
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ScISI_1.38.0.tar.gz
Windows Binary ScISI_1.38.0.zip
Mac OS X 10.6 (Snow Leopard) ScISI_1.38.0.tgz
Mac OS X 10.9 (Mavericks) ScISI_1.38.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center