To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 2.14
Exposes an annotation databases generated from UCSC by exposing these as TranscriptDb objects
Author: Marc Carlson
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("TxDb.Hsapiens.UCSC.hg19.knownGene")
):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene")
Reference Manual |
biocViews | AnnotationData, Genetics, Homo_sapiens, TranscriptDb |
Version | 2.14.0 |
License | Artistic-2.0 |
Depends | GenomicFeatures(>= 1.15.11) |
Imports | GenomicFeatures, AnnotationDbi |
Suggests | |
System Requirements | |
URL | |
Depends On Me | cgdv17, chimera, FunciSNP, Homo.sapiens |
Imports Me | ChIPseeker |
Suggests Me | AllelicImbalance, AnnotationDbi, beadarray, biomvRCNS, biovizBase, bumphunter, ChIPQC, CRISPRseek, FDb.InfiniumMethylation.hg19, gage, GenomicAlignments, GenomicFeatures, GenomicFiles, GenomicRanges, ggbio, gmapR, HTSeqGenie, methyAnalysis, methylumi, rtracklayer, SigFuge, SplicingGraphs, trackViewer, VariantAnnotation, VariantFiltering |
Follow Installation instructions to use this package in your R session.
Package Source | TxDb.Hsapiens.UCSC.hg19.knownGene_2.14.0.tar.gz |
Windows Binary | TxDb.Hsapiens.UCSC.hg19.knownGene_2.14.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | TxDb.Hsapiens.UCSC.hg19.knownGene_2.14.0.tgz |
Mac OS X 10.9 (Mavericks) | TxDb.Hsapiens.UCSC.hg19.knownGene_2.14.0.tgz |
Package Downloads Report | Download Stats |
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