illuminaRatv1.db

Illumina RatRSv1 annotation data (chip illuminaRatv1)

Bioconductor version: 2.6

Illumina Ratv1 annotation data assembled using data from public repositories. Accession IDs taken from Barbosa-Morais NL et al (in prep) http://www.compbio.group.cam.ac.uk/Resources/Annotation/ where only matches with Perfect or Good probe annotation were included and searches were made only against RefSeq accession IDs. This annotation package is to be used with the output from a BeadStudio analysis with Illumina IDs (Search_Key in the original annotation) as keys.

Author: Mark Dunning, Nuno Barbosa-Morais, Matt Ritchie

Maintainer: Mark Dunning <Mark.Dunning at cancer.org.uk>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("illuminaRatv1.db")

To cite this package in a publication, start R and enter:

    citation("illuminaRatv1.db")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, IlluminaChip, Rattus_norvegicus, illuminaRatv1
Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.9.8), org.Rn.eg.db
Imports methods, AnnotationDbi
Suggests annotate
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version 1.6.1

Package Downloads

Package Source illuminaRatv1.db_1.6.1.tar.gz
Windows Binary illuminaRatv1.db_1.6.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary illuminaRatv1.db_1.6.0.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center