Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2022-01-17 13:07:03 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for soGGi on tokay2


To the developers/maintainers of the soGGi package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/soGGi.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1833/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
soGGi 1.26.0  (landing page)
Tom Carroll
Snapshot Date: 2022-01-16 01:55:05 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/soGGi
git_branch: RELEASE_3_14
git_last_commit: 15900b3
git_last_commit_date: 2021-10-26 12:20:13 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: soGGi
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/soGGi_1.26.0.tar.gz && rm -rf soGGi.buildbin-libdir && mkdir soGGi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=soGGi.buildbin-libdir soGGi_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL soGGi_1.26.0.zip && rm soGGi_1.26.0.tar.gz soGGi_1.26.0.zip
StartedAt: 2022-01-16 07:13:06 -0500 (Sun, 16 Jan 2022)
EndedAt: 2022-01-16 07:14:34 -0500 (Sun, 16 Jan 2022)
EllapsedTime: 88.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/soGGi_1.26.0.tar.gz && rm -rf soGGi.buildbin-libdir && mkdir soGGi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=soGGi.buildbin-libdir soGGi_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL soGGi_1.26.0.zip && rm soGGi_1.26.0.tar.gz soGGi_1.26.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  9 3362k    9  324k    0     0  1754k      0  0:00:01 --:--:--  0:00:01 1752k
100 3362k  100 3362k    0     0  5657k      0 --:--:-- --:--:-- --:--:-- 5660k

install for i386

* installing *source* package 'soGGi' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'soGGi'
    finding HTML links ... done
    ChIPprofile                             html  
    Ops                                     html  
    chipExampleBig                          html  
    findconsensusRegions                    html  
    groupByOverlaps                         html  
    ik_Example                              html  
    ik_Profiles                             html  
    manipulateObjects                       html  
    normalise                               html  
    normaliseQuantiles                      html  
    orientBy                                html  
    plotRegion                              html  
    pwmCov                                  html  
    pwmToCoverage                           html  
    singleGRange                            html  
** building package indices
** installing vignettes
   'soggi.Rnw' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'soGGi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'soGGi' as soGGi_1.26.0.zip
* DONE (soGGi)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'soGGi' successfully unpacked and MD5 sums checked