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This page was generated on 2023-02-04 11:05:33 -0500 (Sat, 04 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4511
palomino4Windows Server 2022 Datacenterx644.2.2 (2022-10-31 ucrt) -- "Innocent and Trusting" 4289
lconwaymacOS 12.5.1 Montereyx86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4318
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for soGGi on palomino4


To the developers/maintainers of the soGGi package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/soGGi.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1913/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
soGGi 1.30.0  (landing page)
Tom Carroll
Snapshot Date: 2023-02-03 14:00:04 -0500 (Fri, 03 Feb 2023)
git_url: https://git.bioconductor.org/packages/soGGi
git_branch: RELEASE_3_16
git_last_commit: 81e9ccd
git_last_commit_date: 2022-11-01 11:11:34 -0500 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.5.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: soGGi
Version: 1.30.0
Command: chmod a+r soGGi -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data soGGi
StartedAt: 2023-02-03 21:39:31 -0500 (Fri, 03 Feb 2023)
EndedAt: 2023-02-03 21:40:54 -0500 (Fri, 03 Feb 2023)
EllapsedTime: 83.1 seconds
RetCode: 0
Status:   OK  
PackageFile: soGGi_1.30.0.tar.gz
PackageFileSize: 3.053 MiB

Command output

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###
### Running command:
###
###   chmod a+r soGGi -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data soGGi
###
##############################################################################
##############################################################################


* checking for file 'soGGi/DESCRIPTION' ... OK
* preparing 'soGGi':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
Warning: 'inst/doc' files
    'soggi.Rnw', 'soggi.pdf'
  ignored as vignettes have been rebuilt.
  Run R CMD build with --no-build-vignettes to prevent rebuilding.
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    'soGGi/data/chipExampleBig.rda' 'soGGi/data/ik_Example.rda'
    'soGGi/data/ik_Profiles.rda' 'soGGi/data/singleGRange.rda'
* building 'soGGi_1.30.0.tar.gz'