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This page was generated on 2021-10-13 15:05:39 -0400 (Wed, 13 Oct 2021).

BUILD BIN results for seqCNA on tokay2

To the developers/maintainers of the seqCNA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/seqCNA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1734/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
seqCNA 1.38.0  (landing page)
David Mosen-Ansorena
Snapshot Date: 2021-10-12 04:50:13 -0400 (Tue, 12 Oct 2021)
git_url: https://git.bioconductor.org/packages/seqCNA
git_branch: RELEASE_3_13
git_last_commit: 9827ffc
git_last_commit_date: 2021-05-19 11:59:36 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: seqCNA
Version: 1.38.0
Command: rm -rf seqCNA.buildbin-libdir && mkdir seqCNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqCNA.buildbin-libdir seqCNA_1.38.0.tar.gz
StartedAt: 2021-10-13 11:20:53 -0400 (Wed, 13 Oct 2021)
EndedAt: 2021-10-13 11:22:18 -0400 (Wed, 13 Oct 2021)
EllapsedTime: 85.1 seconds
RetCode: 0
Status:   OK  
PackageFile: seqCNA_1.38.0.zip
PackageFileSize: 1.941 MiB

Command output

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###
### Running command:
###
###   rm -rf seqCNA.buildbin-libdir && mkdir seqCNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqCNA.buildbin-libdir seqCNA_1.38.0.tar.gz
###
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install for i386

* installing *source* package 'seqCNA' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c seqCNA.cpp -o seqCNA.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o seqCNA.dll tmp.def seqCNA.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/seqCNA.buildbin-libdir/00LOCK-seqCNA/00new/seqCNA/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'seqCNA'
    finding HTML links ... done
    SeqCNAInfo-class                        html  
    applyFilters                            html  
    applyThresholds                         html  
    plotCNProfile                           html  
    readSeqsumm                             html  
    runGLAD                                 html  
    runSeqnorm                              html  
    runSeqsumm                              html  
    seqCNA-package                          html  
    seqsumm_HCC1143                         html  
    writeCNProfile                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'seqCNA' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c seqCNA.cpp -o seqCNA.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o seqCNA.dll tmp.def seqCNA.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/seqCNA.buildbin-libdir/seqCNA/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'seqCNA' as seqCNA_1.38.0.zip
* DONE (seqCNA)