Back to Multiple platform build/check report for BioC 3.18: simplified long |
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This page was generated on 2024-03-18 11:36:20 -0400 (Mon, 18 Mar 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4665 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" | 4401 |
merida1 | macOS 12.7.1 Monterey | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4425 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 1892/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
scran 1.30.2 (landing page) Aaron Lun
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | OK | |||||||||
merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the scran package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scran.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: scran |
Version: 1.30.2 |
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:scran.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings scran_1.30.2.tar.gz |
StartedAt: 2024-03-16 02:19:49 -0400 (Sat, 16 Mar 2024) |
EndedAt: 2024-03-16 02:19:55 -0400 (Sat, 16 Mar 2024) |
EllapsedTime: 5.3 seconds |
RetCode: 1 |
Status: ERROR |
CheckDir: scran.Rcheck |
Warnings: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:scran.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings scran_1.30.2.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/scran.Rcheck’ * using R version 4.3.3 (2024-02-29) * using platform: x86_64-pc-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 * running under: Ubuntu 22.04.4 LTS * using session charset: UTF-8 * checking for file ‘scran/DESCRIPTION’ ... OK * this is package ‘scran’ version ‘1.30.2’ * checking package namespace information ... OK * checking package dependencies ... ERROR Package suggested but not available: ‘monocle’ The suggested packages are required for a complete check. Checking can be attempted without them by setting the environment variable _R_CHECK_FORCE_SUGGESTS_ to a false value. See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. * DONE Status: 1 ERROR See ‘/home/biocbuild/bbs-3.18-bioc/meat/scran.Rcheck/00check.log’ for details.