############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r scTensor -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data scTensor ### ############################################################################## ############################################################################## * checking for file 'scTensor/DESCRIPTION' ... OK * preparing 'scTensor': * checking DESCRIPTION meta-information ... OK * installing the package to process help pages * saving partial Rd database * creating vignettes ... ERROR --- re-building 'scTensor.Rmd' using rmarkdown Quitting from lines 68-71 [AHub1] (scTensor.Rmd) Error: processing vignette 'scTensor.Rmd' failed with diagnostics: Corrupt Cache: index file See AnnotationHub's TroubleshootingTheHubs vignette section on corrupt cache cache: F:\biocbuild\AnnotationHub_cache filename: annotationhub.index.rds --- failed re-building 'scTensor.Rmd' --- re-building 'scTensor_1_Data_format_ID_Conversion.Rmd' using rmarkdown Quitting from lines 152-164 [Ensembl with AnnotationHub] (scTensor_1_Data_format_ID_Conversion.Rmd) Error: processing vignette 'scTensor_1_Data_format_ID_Conversion.Rmd' failed with diagnostics: Corrupt Cache: index file See AnnotationHub's TroubleshootingTheHubs vignette section on corrupt cache cache: F:\biocbuild\AnnotationHub_cache filename: annotationhub.index.rds --- failed re-building 'scTensor_1_Data_format_ID_Conversion.Rmd' --- re-building 'scTensor_2_Report_Interpretation.Rmd' using rmarkdown --- finished re-building 'scTensor_2_Report_Interpretation.Rmd' --- re-building 'scTensor_3_CCI_Simulation.Rmd' using rmarkdown --- finished re-building 'scTensor_3_CCI_Simulation.Rmd' --- re-building 'scTensor_4_Reanalysis.Rmd' using rmarkdown --- finished re-building 'scTensor_4_Reanalysis.Rmd' SUMMARY: processing the following files failed: 'scTensor.Rmd' 'scTensor_1_Data_format_ID_Conversion.Rmd' Error: Vignette re-building failed. Execution halted