############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf rhdf5filters.buildbin-libdir && mkdir rhdf5filters.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh rhdf5filters_1.14.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R rhdf5filters.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=rhdf5filters.buildbin-libdir rhdf5filters_1.14.1.tar.gz' >>>>>>> * installing *source* package ‘rhdf5filters’ ... ** using staged installation rm: src/bzip2/libH5Zbz2.so.dSYM: is a directory checking for gcc... clang -arch x86_64 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang -arch x86_64 accepts -g... yes checking for clang -arch x86_64 option to enable C11 features... none needed configure: is Bioc build machine configure: configuring BZIP2 filter... configure: compiling bundled bzip2 library configure: configuring the Zstd filter... configure: compiling bundled Zstd library configure: configuring the BLOSC filter... configure: compiling bundled BLOSC library checking whether C compiler accepts -msse2... yes configure: Bioc build machine; disabling MAVX2 checking for gcc __builtin_cpu_init function... (cached) true checking for x86 sse2 instruction support... yes configure: configuring the VBZ filter machine=x86_64 CPU_ARCH=x86 checking whether C compiler accepts -mavx... yes checking for x86 avx instruction support... yes VBZ_FLAGS=-mssse3 configure: creating ./config.status config.status: creating src/bzip2/Makefile config.status: creating src/zstd/Makefile config.status: creating src/blosc/lib/blosc-1.20.1/Makefile config.status: creating src/blosc/Makefile config.status: creating src/vbz/Makefile config.status: creating src/vbz/vbz/Makefile config.status: creating src/vbz/third_party/streamvbyte/Makefile config.status: creating src/Makevars ** libs using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ make -C zstd clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/debug.c -o common/debug.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/entropy_common.c -o common/entropy_common.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/error_private.c -o common/error_private.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/fse_decompress.c -o common/fse_decompress.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/pool.c -o common/pool.o -o common/pool.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/threading.c -o common/threading.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/xxhash.c -o common/xxhash.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c common/zstd_common.c -o common/zstd_common.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/fse_compress.c -o compress/fse_compress.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/hist.c -o compress/hist.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/huf_compress.c -o compress/huf_compress.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_compress.c -o compress/zstd_compress.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_compress_literals.c -o compress/zstd_compress_literals.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_compress_sequences.c -o compress/zstd_compress_sequences.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_compress_superblock.c -o compress/zstd_compress_superblock.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_double_fast.c -o compress/zstd_double_fast.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_fast.c -o compress/zstd_fast.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_lazy.c -o compress/zstd_lazy.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_ldm.c -o compress/zstd_ldm.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstd_opt.c -o compress/zstd_opt.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c compress/zstdmt_compress.c -o compress/zstdmt_compress.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c decompress/huf_decompress.c -o decompress/huf_decompress.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c decompress/zstd_ddict.c -o decompress/zstd_ddict.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c decompress/zstd_decompress.c -o decompress/zstd_decompress.o clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I. -I./common -DXXH_NAMESPACE=ZSTD_ -DZSTD_DISABLE_ASM -c decompress/zstd_decompress_block.c -o decompress/zstd_decompress_block.o rm -f libzstd.a ar cq libzstd.a common/debug.o common/entropy_common.o common/error_private.o common/fse_decompress.o common/pool.o common/threading.o common/xxhash.o common/zstd_common.o compress/fse_compress.o compress/hist.o compress/huf_compress.o compress/zstd_compress.o compress/zstd_compress_literals.o compress/zstd_compress_sequences.o compress/zstd_compress_superblock.o compress/zstd_double_fast.o compress/zstd_fast.o compress/zstd_lazy.o compress/zstd_ldm.o compress/zstd_opt.o compress/zstdmt_compress.o decompress/huf_decompress.o decompress/zstd_ddict.o decompress/zstd_decompress.o decompress/zstd_decompress_block.o ranlib libzstd.a clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -shared H5Zzstd.c -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" \ -I. -Icommon ../zstd/libzstd.a -L/opt/R/x86_64/lib -o libH5Zzstd.so make -C blosc make -C lib/snappy-1.1.1 clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -c snappy.cc snappy.cc:567:13: warning: unused function 'ComputeTable' [-Wunused-function] static void ComputeTable() { ^ 1 warning generated. clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -c snappy-c.cc clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -c snappy-sinksource.cc clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -c snappy-stubs-internal.cc make -C lib/lz4-1.9.4 clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -c lz4.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -c lz4hc.c make -C lib/blosc-1.20.1 all clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -c bitshuffle-sse2.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -c shuffle-sse2.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -c bitshuffle-generic.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -c shuffle-generic.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -DSHUFFLE_SSE2_ENABLED -c shuffle.c In file included from shuffle.c:12: ./shuffle-generic.h:32:13: warning: unused function 'shuffle_generic_inline' [-Wunused-function] static void shuffle_generic_inline(const size_t type_size, ^ ./shuffle-generic.h:61:13: warning: unused function 'unshuffle_generic_inline' [-Wunused-function] static void unshuffle_generic_inline(const size_t type_size, ^ 2 warnings generated. clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -c blosclz.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -c blosc.c blosc.c:737:11: warning: variable 'ctbytes' set but not used [-Wunused-but-set-variable] int32_t ctbytes = 0; /* number of compressed bytes in block */ ^ 1 warning generated. clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../lz4-1.9.4 -I../snappy-1.1.1 -I../../../zstd -msse2 -c fastcopy.c rm -f libblosc.a ar cq libblosc.a lib/blosc-1.20.1/blosc.o lib/blosc-1.20.1/shuffle-sse2.o lib/blosc-1.20.1/bitshuffle-generic.o lib/blosc-1.20.1/blosclz.o lib/blosc-1.20.1/shuffle.o lib/blosc-1.20.1/bitshuffle-sse2.o lib/blosc-1.20.1/fastcopy.o lib/blosc-1.20.1/shuffle-generic.o lib/snappy-1.1.1/snappy.o lib/snappy-1.1.1/snappy-c.o lib/snappy-1.1.1/snappy-sinksource.o lib/snappy-1.1.1/snappy-stubs-internal.o lib/lz4-1.9.4/lz4.o lib/lz4-1.9.4/lz4hc.o ranlib libblosc.a clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -shared -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" H5Zblosc.cpp \ -L/opt/R/x86_64/lib -I./lib/blosc-1.20.1 ./libblosc.a ../zstd/libzstd.a -lz -o libH5Zblosc.so make -C bzip2 make -C bzip2-1.0.8 clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -D_FILE_OFFSET_BITS=64 -c blocksort.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -D_FILE_OFFSET_BITS=64 -c huffman.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -D_FILE_OFFSET_BITS=64 -c crctable.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -D_FILE_OFFSET_BITS=64 -c randtable.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -D_FILE_OFFSET_BITS=64 -c compress.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -D_FILE_OFFSET_BITS=64 -c decompress.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -D_FILE_OFFSET_BITS=64 -c bzlib.c rm -f libbz2.a ar cq libbz2.a blocksort.o huffman.o crctable.o randtable.o compress.o decompress.o bzlib.o ranlib libbz2.a clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -shared H5Zbzip2.c -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" \ -Ibzip2-1.0.8 bzip2-1.0.8/libbz2.a -L/opt/R/x86_64/lib -o libH5Zbz2.so make -C lzf make -C lzf clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -c lzf_c.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -c lzf_d.c rm -f liblzf.a ar cq liblzf.a lzf_c.o lzf_d.o ranlib liblzf.a clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -shared H5Zlzf.c -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" \ -I./lzf/ ./lzf/liblzf.a -L/opt/R/x86_64/lib -o libH5Zlzf.so make -C vbz make -C third_party/streamvbyte clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -Iinclude -std=c99 -mavx -c ./src/streamvbyte_decode.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -Iinclude -std=c99 -mavx -c ./src/streamvbyte_encode.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -Iinclude -std=c99 -mavx -c ./src/streamvbytedelta_decode.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -Iinclude -std=c99 -mavx -c ./src/streamvbytedelta_encode.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -Iinclude -std=c99 -mavx -c ./src/streamvbyte_0124_encode.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -Iinclude -std=c99 -mavx -c ./src/streamvbyte_0124_decode.c clang -arch x86_64 -falign-functions=64 -Wall -g -O2 -fPIC -Iinclude -std=c99 -mavx -c ./src/streamvbyte_zigzag.c rm -f libstreamvbyte.a ar cq libstreamvbyte.a streamvbyte_decode.o streamvbyte_encode.o streamvbytedelta_decode.o streamvbytedelta_encode.o streamvbyte_0124_encode.o streamvbyte_0124_decode.o streamvbyte_zigzag.o ranlib libstreamvbyte.a make -C vbz clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../third_party/streamvbyte/include/ -I../third_party/ -I../../zstd/ -mssse3 -c vbz.cpp -o vbz.o clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../third_party/streamvbyte/include/ -I../third_party/ -I../../zstd/ -mssse3 -c v0/vbz_streamvbyte.cpp -o v0/vbz_streamvbyte.o clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I../third_party/streamvbyte/include/ -I../third_party/ -I../../zstd/ -mssse3 -c v1/vbz_streamvbyte.cpp -o v1/vbz_streamvbyte.o rm -f libvbz.a ar cq libvbz.a vbz/vbz.o vbz/v0/vbz_streamvbyte.o vbz/v1/vbz_streamvbyte.o ranlib libvbz.a clang++ -arch x86_64 -std=gnu++17 -falign-functions=64 -Wall -g -O2 -fPIC -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -shared vbz_plugin.cpp \ libvbz.a -L/opt/R/x86_64/lib ../zstd/libzstd.a third_party/streamvbyte/libstreamvbyte.a -o libH5Zvbz.so mkdir -p "/Users/biocbuild/bbs-3.18-bioc/meat/rhdf5filters.buildbin-libdir/00LOCK-rhdf5filters/00new/rhdf5filters/lib/" cp bzip2/libH5Zbz2.so blosc/libH5Zblosc.so lzf/libH5Zlzf.so zstd/libH5Zzstd.so vbz/libH5Zvbz.so "/Users/biocbuild/bbs-3.18-bioc/meat/rhdf5filters.buildbin-libdir/00LOCK-rhdf5filters/00new/rhdf5filters/lib/" clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -I"/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include" -I'/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/Rhdf5lib/include' -I/opt/R/x86_64/include -falign-functions=64 -Wall -g -O2 -fPIC -falign-functions=64 -Wall -g -O2 -c rhdf5filters.c -o rhdf5filters.o clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o rhdf5filters.so rhdf5filters.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.18-bioc/meat/rhdf5filters.buildbin-libdir/00LOCK-rhdf5filters/00new/rhdf5filters/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rhdf5filters) >>>>>>> >>>>>>> FIXING PATHS TO DYNAMIC LIBRARIES FOR rhdf5filters.buildbin-libdir/rhdf5filters/libs/rhdf5filters.so >>>>>>> >>>>>>> Paths before fix: rhdf5filters.buildbin-libdir/rhdf5filters/libs/rhdf5filters.so: rhdf5filters.so (compatibility version 0.0.0, current version 0.0.0) /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libR.dylib (compatibility version 4.3.0, current version 4.3.3) /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 1775.118.101) /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1292.100.5) >>>>>>> Fix with install_name_tool: install_name_tool -change "/usr/local/lib/libgcc_s.1.1.dylib" "/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libgcc_s.1.1.dylib" "rhdf5filters.buildbin-libdir/rhdf5filters/libs/rhdf5filters.so" install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libgfortran.5.dylib" "rhdf5filters.buildbin-libdir/rhdf5filters/libs/rhdf5filters.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libquadmath.0.dylib" "rhdf5filters.buildbin-libdir/rhdf5filters/libs/rhdf5filters.so" >>>>>>> Paths after fix: rhdf5filters.buildbin-libdir/rhdf5filters/libs/rhdf5filters.so: rhdf5filters.so (compatibility version 0.0.0, current version 0.0.0) /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libR.dylib (compatibility version 4.3.0, current version 4.3.3) /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 1775.118.101) /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1292.100.5)