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INSTALL report for proFIA on nebbiolo1

This page was generated on 2021-03-03 12:12:54 -0500 (Wed, 03 Mar 2021).

To the developers/maintainers of the proFIA package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1392/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
proFIA 1.16.0
Alexis Delabriere
Snapshot Date: 2021-03-02 14:50:31 -0500 (Tue, 02 Mar 2021)
URL: https://git.bioconductor.org/packages/proFIA
Branch: RELEASE_3_12
Last Commit: 18a3bec
Last Changed Date: 2020-10-27 11:19:13 -0500 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    ERROR  skipped
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay1Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: proFIA
Version: 1.16.0
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL proFIA
StartedAt: 2021-03-02 17:09:19 -0500 (Tue, 02 Mar 2021)
EndedAt: 2021-03-02 17:10:29 -0500 (Tue, 02 Mar 2021)
EllapsedTime: 70.7 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL proFIA
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* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘proFIA’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c FIABandsExtractionCentroid.c -o FIABandsExtractionCentroid.o
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c UtilFunc.c -o UtilFunc.o
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c fastMatchPpm.c -o fastMatchPpm.o
gcc -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o proFIA.so FIABandsExtractionCentroid.o UtilFunc.o fastMatchPpm.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-proFIA/00new/proFIA/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (proFIA)