##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-beta-2024-04-15_r86425/bin/R CMD build --keep-empty-dirs --no-resave-data paxtoolsr
###
##############################################################################
##############################################################################


* checking for file ‘paxtoolsr/DESCRIPTION’ ... OK
* preparing ‘paxtoolsr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘using_paxtoolsr.Rmd’ using rmarkdown
2024-05-09 02:25:15,322 648  [main] INFO  org.biopax.paxtools.PaxtoolsMain  - toSif: not blacklisting ubiquitous molecules (no blacklist.txt found)
2024-05-09 02:25:15,961 1287 [main] INFO  org.biopax.paxtools.PaxtoolsMain  - toSifnx: not blacklisting ubiquitous molecules (no blacklist.txt found)

Quitting from lines  at lines 169-171 [searchResultsExampleVerbose] (using_paxtoolsr.Rmd)
Error: processing vignette 'using_paxtoolsr.Rmd' failed with diagnostics:
Received HTTP/0.9 when not allowed
--- failed re-building ‘using_paxtoolsr.Rmd’

SUMMARY: processing the following file failed:
  ‘using_paxtoolsr.Rmd’

Error: Vignette re-building failed.
Execution halted