############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL nethet ### ############################################################################## ############################################################################## * installing to library 'F:/biocbuild/bbs-3.19-bioc/R/library' * installing *source* package 'nethet' ... ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 13.2.0' gcc -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c betamat_diffnet.c -o betamat_diffnet.o gcc -shared -s -static-libgcc -o nethet.dll tmp.def betamat_diffnet.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.19-bioc/R/library/00LOCK-nethet/00new/nethet/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'nethet' Warning: replacing previous import 'mclust::dmvnorm' by 'mvtnorm::dmvnorm' when loading 'nethet' Warning: replacing previous import 'multtest::update' by 'stats::update' when loading 'nethet' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'nethet' Warning: replacing previous import 'mclust::dmvnorm' by 'mvtnorm::dmvnorm' when loading 'nethet' Warning: replacing previous import 'multtest::update' by 'stats::update' when loading 'nethet' ** testing if installed package can be loaded from final location Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'nethet' Warning: replacing previous import 'mclust::dmvnorm' by 'mvtnorm::dmvnorm' when loading 'nethet' Warning: replacing previous import 'multtest::update' by 'stats::update' when loading 'nethet' ** testing if installed package keeps a record of temporary installation path * DONE (nethet)