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This page was generated on 2023-09-26 11:37:39 -0400 (Tue, 26 Sep 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4625
palomino3Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4378
merida1macOS 12.6.4 Montereyx86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4394
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1342/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
muscat 1.14.0  (landing page)
Helena L. Crowell
Snapshot Date: 2023-09-25 14:00:11 -0400 (Mon, 25 Sep 2023)
git_url: https://git.bioconductor.org/packages/muscat
git_branch: RELEASE_3_17
git_last_commit: 2f8d169
git_last_commit_date: 2023-04-25 11:12:01 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

BUILD BIN results for muscat on merida1


To the developers/maintainers of the muscat package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/muscat.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: muscat
Version: 1.14.0
Command: rm -rf muscat.buildbin-libdir && mkdir muscat.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh muscat_1.14.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R muscat.buildbin-libdir
StartedAt: 2023-09-26 10:04:31 -0400 (Tue, 26 Sep 2023)
EndedAt: 2023-09-26 10:06:36 -0400 (Tue, 26 Sep 2023)
EllapsedTime: 124.8 seconds
RetCode: 0
Status:   OK  
PackageFile: muscat_1.14.0.tgz
PackageFileSize: 5.562 MiB

Command output

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###
### Running command:
###
###   rm -rf muscat.buildbin-libdir && mkdir muscat.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh muscat_1.14.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R muscat.buildbin-libdir
###
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##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=muscat.buildbin-libdir muscat_1.14.0.tar.gz'
>>>>>>> 

* installing *source* package ‘muscat’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.6.0
Current Matrix version is 1.6.1.1
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
Warning in checkDepPackageVersion(dep_pkg = "TMB") :
  Package version inconsistency detected.
glmmTMB was built with TMB version 1.9.3
Current TMB version is 1.9.6
Please re-install glmmTMB from source or restore original ‘TMB’ package (see '?reinstalling' for more information)
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.6.0
Current Matrix version is 1.6.1.1
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
Warning in checkDepPackageVersion(dep_pkg = "TMB") :
  Package version inconsistency detected.
glmmTMB was built with TMB version 1.9.3
Current TMB version is 1.9.6
Please re-install glmmTMB from source or restore original ‘TMB’ package (see '?reinstalling' for more information)
** testing if installed package can be loaded from final location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.6.0
Current Matrix version is 1.6.1.1
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
Warning in checkDepPackageVersion(dep_pkg = "TMB") :
  Package version inconsistency detected.
glmmTMB was built with TMB version 1.9.3
Current TMB version is 1.9.6
Please re-install glmmTMB from source or restore original ‘TMB’ package (see '?reinstalling' for more information)
** testing if installed package keeps a record of temporary installation path
* DONE (muscat)