Back to Multiple platform build/check report for BioC 3.18:   simplified   long
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2024-03-27 11:37:46 -0400 (Wed, 27 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4667
palomino4Windows Server 2022 Datacenterx644.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" 4403
merida1macOS 12.7.1 Montereyx86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4426
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1143/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mAPKL 1.32.0  (landing page)
Argiris Sakellariou
Snapshot Date: 2024-03-25 14:05:07 -0400 (Mon, 25 Mar 2024)
git_url: https://git.bioconductor.org/packages/mAPKL
git_branch: RELEASE_3_18
git_last_commit: b2b6b36
git_last_commit_date: 2023-10-24 10:41:04 -0400 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

BUILD results for mAPKL on merida1


To the developers/maintainers of the mAPKL package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mAPKL.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: mAPKL
Version: 1.32.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data mAPKL
StartedAt: 2024-03-25 19:39:29 -0400 (Mon, 25 Mar 2024)
EndedAt: 2024-03-25 19:40:26 -0400 (Mon, 25 Mar 2024)
EllapsedTime: 57.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data mAPKL
###
##############################################################################
##############################################################################


* checking for file ‘mAPKL/DESCRIPTION’ ... OK
* preparing ‘mAPKL’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘mAPKL.Rnw’ using knitr

Quitting from lines 87-92 [unnamed-chunk-1] (mAPKL.Rnw)
Error: processing vignette 'mAPKL.Rnw' failed with diagnostics:
cannot xtfrm data frames
--- failed re-building ‘mAPKL.Rnw’

SUMMARY: processing the following file failed:
  ‘mAPKL.Rnw’

Error: Vignette re-building failed.
Execution halted