Back to Multiple platform build/check report for BioC 3.16
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This page was generated on 2023-02-01 11:08:18 -0500 (Wed, 01 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4511
palomino4Windows Server 2022 Datacenterx644.2.2 (2022-10-31 ucrt) -- "Innocent and Trusting" 4289
lconwaymacOS 12.5.1 Montereyx86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4318
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ctgGEM on lconway


To the developers/maintainers of the ctgGEM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ctgGEM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 452/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ctgGEM 1.10.0  (landing page)
USD Biomedical Engineering
Snapshot Date: 2023-01-31 14:00:04 -0500 (Tue, 31 Jan 2023)
git_url: https://git.bioconductor.org/packages/ctgGEM
git_branch: RELEASE_3_16
git_last_commit: 4e46726
git_last_commit_date: 2022-11-01 11:21:23 -0500 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: ctgGEM
Version: 1.10.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ctgGEM
StartedAt: 2023-01-31 15:19:16 -0500 (Tue, 31 Jan 2023)
EndedAt: 2023-01-31 15:19:17 -0500 (Tue, 31 Jan 2023)
EllapsedTime: 0.8 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ctgGEM
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘ctgGEM’ ...
** using staged installation
** R
Error in .install_package_code_files(".", instdir) : 
files in 'Collate' field missing from '/Users/biocbuild/bbs-3.16-bioc/meat/ctgGEM/R':
  zzz.R
ERROR: unable to collate and parse R files for package ‘ctgGEM’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library/ctgGEM’