############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r cliqueMS -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data cliqueMS ### ############################################################################## ############################################################################## * checking for file 'cliqueMS/DESCRIPTION' ... OK * preparing 'cliqueMS': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'annotate_features.Rmd' using rmarkdown Quitting from lines 55-61 [xcms] (annotate_features.Rmd) Error: processing vignette 'annotate_features.Rmd' failed with diagnostics: could not find function "readMSData" --- failed re-building 'annotate_features.Rmd' SUMMARY: processing the following file failed: 'annotate_features.Rmd' Error: Vignette re-building failed. Execution halted