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This page was generated on 2021-11-24 15:05:22 -0500 (Wed, 24 Nov 2021).

INSTALL results for cBioPortalData on tokay2

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raw results

Package 254/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cBioPortalData 2.6.0  (landing page)
Marcel Ramos
Snapshot Date: 2021-11-23 04:15:06 -0500 (Tue, 23 Nov 2021)
git_url: https://git.bioconductor.org/packages/cBioPortalData
git_branch: RELEASE_3_14
git_last_commit: d8a1095
git_last_commit_date: 2021-10-26 12:59:53 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: cBioPortalData
Version: 2.6.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/cBioPortalData_2.6.0.tar.gz && rm -rf cBioPortalData.buildbin-libdir && mkdir cBioPortalData.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cBioPortalData.buildbin-libdir cBioPortalData_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL cBioPortalData_2.6.0.zip && rm cBioPortalData_2.6.0.tar.gz cBioPortalData_2.6.0.zip
StartedAt: 2021-11-23 08:55:55 -0500 (Tue, 23 Nov 2021)
EndedAt: 2021-11-23 08:57:15 -0500 (Tue, 23 Nov 2021)
EllapsedTime: 80.5 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/cBioPortalData_2.6.0.tar.gz && rm -rf cBioPortalData.buildbin-libdir && mkdir cBioPortalData.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cBioPortalData.buildbin-libdir cBioPortalData_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL cBioPortalData_2.6.0.zip && rm cBioPortalData_2.6.0.tar.gz cBioPortalData_2.6.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 67466  100 67466    0     0   153k      0 --:--:-- --:--:-- --:--:--  153k

install for i386

* installing *source* package 'cBioPortalData' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cBioPortalData'
    finding HTML links ... done
    cBioCache                               html  
    cBioDataPack                            html  
    finding level-2 HTML links ... done

    cBioPortal-class                        html  
    cBioPortal                              html  
    cBioPortalData                          html  
    downloadStudy                           html  
    studiesTable                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cBioPortalData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cBioPortalData' as cBioPortalData_2.6.0.zip
* DONE (cBioPortalData)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'cBioPortalData' successfully unpacked and MD5 sums checked