Back to Multiple platform build/check report for BioC 3.15
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-06-24 12:05:41 -0400 (Fri, 24 Jun 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_644.2.0 (2022-04-22) -- "Vigorous Calisthenics" 4380
palomino3Windows Server 2022 Datacenterx644.2.0 (2022-04-22 ucrt) -- "Vigorous Calisthenics" 4156
merida1macOS 10.14.6 Mojavex86_644.2.0 (2022-04-22) -- "Vigorous Calisthenics" 4221
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for biodbKegg on palomino3


To the developers/maintainers of the biodbKegg package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biodbKegg.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 180/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biodbKegg 1.2.0  (landing page)
Pierrick Roger
Snapshot Date: 2022-06-23 13:55:15 -0400 (Thu, 23 Jun 2022)
git_url: https://git.bioconductor.org/packages/biodbKegg
git_branch: RELEASE_3_15
git_last_commit: 3167f7e
git_last_commit_date: 2022-04-26 12:19:28 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: biodbKegg
Version: 1.2.0
Command: chmod a+r biodbKegg -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data biodbKegg
StartedAt: 2022-06-23 17:21:37 -0400 (Thu, 23 Jun 2022)
EndedAt: 2022-06-23 17:22:19 -0400 (Thu, 23 Jun 2022)
EllapsedTime: 41.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r biodbKegg -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data biodbKegg
###
##############################################################################
##############################################################################


* checking for file 'biodbKegg/DESCRIPTION' ... OK
* preparing 'biodbKegg':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'biodbKegg.Rmd' using rmarkdown
Quitting from lines 95-96 (biodbKegg.Rmd) 
Error: processing vignette 'biodbKegg.Rmd' failed with diagnostics:
attempt to apply non-function
--- failed re-building 'biodbKegg.Rmd'

SUMMARY: processing the following file failed:
  'biodbKegg.Rmd'

Error: Vignette re-building failed.
Execution halted