Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

This page was generated on 2021-12-01 17:18:09 -0500 (Wed, 01 Dec 2021).

INSTALL results for TSRchitect on tokay2

To the developers/maintainers of the TSRchitect package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TSRchitect.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2013/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TSRchitect 1.20.0  (landing page)
R. Taylor Raborn
Snapshot Date: 2021-11-30 04:15:05 -0500 (Tue, 30 Nov 2021)
git_url: https://git.bioconductor.org/packages/TSRchitect
git_branch: RELEASE_3_14
git_last_commit: 3f5e213
git_last_commit_date: 2021-10-26 12:35:22 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: TSRchitect
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TSRchitect_1.20.0.tar.gz && rm -rf TSRchitect.buildbin-libdir && mkdir TSRchitect.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TSRchitect.buildbin-libdir TSRchitect_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TSRchitect_1.20.0.zip && rm TSRchitect_1.20.0.tar.gz TSRchitect_1.20.0.zip
StartedAt: 2021-11-30 09:05:02 -0500 (Tue, 30 Nov 2021)
EndedAt: 2021-11-30 09:06:30 -0500 (Tue, 30 Nov 2021)
EllapsedTime: 88.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TSRchitect_1.20.0.tar.gz && rm -rf TSRchitect.buildbin-libdir && mkdir TSRchitect.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TSRchitect.buildbin-libdir TSRchitect_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TSRchitect_1.20.0.zip && rm TSRchitect_1.20.0.tar.gz TSRchitect_1.20.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 11  874k   11  101k    0     0   540k      0  0:00:01 --:--:--  0:00:01  540k
100  874k  100  874k    0     0  1820k      0 --:--:-- --:--:-- --:--:-- 1822k

install for i386

* installing *source* package 'TSRchitect' ...
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TSRchitect'
    finding HTML links ... done
    TSRchitectUsersGuide                    html  
    TSRmshapeIndex                          html  
    TSRshapeIndex                           html  
    addAnnotationToTSR-methods              html  
    finding level-2 HTML links ... done

    addTagCountsToTSR-methods               html  
    bedToTSS-methods                        html  
    createSummarizedExperiment-methods      html  
    detTSR-methods                          html  
    determineTSR-methods                    html  
    getBamDataFirstRead-methods             html  
    getBamDataLastRead-methods              html  
    getFileNames-methods                    html  
    getTSRdata-methods                      html  
    getTSScountData-methods                 html  
    getTSStagData-methods                   html  
    getTitle-methods                        html  
    gsq2bed-methods                         html  
    importAnnotationExternal-methods        html  
    importAnnotationHub-methods             html  
    inputToTSS-methods                      html  
    loadTSSobj-methods                      html  
    makeGRangesFromTSR-methods              html  
    mergeSampleData-methods                 html  
    prcTSS                                  html  
    processTSS-methods                      html  
    tagCountTSS                             html  
    tsrCluster                              html  
    tssArrayProperties                      html  
    tssObject                               html  
    writeTSR-methods                        html  
    writeTSS-methods                        html  
** building package indices
** installing vignettes
   'TSRchitect.Rmd' using 'UTF-8' 
   'TSRchitectUsersGuide.Rmd' using 'UTF-8' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TSRchitect' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TSRchitect' as TSRchitect_1.20.0.zip
* DONE (TSRchitect)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'TSRchitect' successfully unpacked and MD5 sums checked