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This page was generated on 2022-01-17 13:07:06 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4077
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4138
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for STATegRa on tokay2


To the developers/maintainers of the STATegRa package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/STATegRa.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1887/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
STATegRa 1.30.0  (landing page)
David Gomez-Cabrero , NĂºria Planell
Snapshot Date: 2022-01-16 01:55:05 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/STATegRa
git_branch: RELEASE_3_14
git_last_commit: 9124807
git_last_commit_date: 2021-10-26 12:17:04 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: STATegRa
Version: 1.30.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/STATegRa_1.30.0.tar.gz && rm -rf STATegRa.buildbin-libdir && mkdir STATegRa.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STATegRa.buildbin-libdir STATegRa_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL STATegRa_1.30.0.zip && rm STATegRa_1.30.0.tar.gz STATegRa_1.30.0.zip
StartedAt: 2022-01-16 05:08:05 -0500 (Sun, 16 Jan 2022)
EndedAt: 2022-01-16 05:10:08 -0500 (Sun, 16 Jan 2022)
EllapsedTime: 122.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/STATegRa_1.30.0.tar.gz && rm -rf STATegRa.buildbin-libdir && mkdir STATegRa.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STATegRa.buildbin-libdir STATegRa_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL STATegRa_1.30.0.zip && rm STATegRa_1.30.0.tar.gz STATegRa_1.30.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3177k  100 3177k    0     0  5678k      0 --:--:-- --:--:-- --:--:-- 5674k

install for i386

* installing *source* package 'STATegRa' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'STATegRa'
    finding HTML links ... done
    STATegRa-defunct                        html  
    STATegRa                                html  
    STATegRaUsersGuide                      html  
    STATegRa_data                           html  
    STATegRa_data_TCGA_BRCA                 html  
    bioDist                                 html  
    bioDistFeature                          html  
    bioDistFeaturePlot                      html  
    bioDistW                                html  
    bioDistWPlot                            html  
    bioDistclass                            html  
    bioMap                                  html  
    caClass-class                           html  
    combiningMappings                       html  
    createOmicsExpressionSet                html  
    getInitialData                          html  
    getLoadings                             html  
    getMethodInfo                           html  
    getPreprocessing                        html  
    getScores                               html  
    getVAF                                  html  
    holistOmics                             html  
    modelSelection                          html  
    finding level-2 HTML links ... done

    omicsCompAnalysis                       html  
    omicsNPC                                html  
    plotRes                                 html  
    plotVAF                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'STATegRa' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'STATegRa' as STATegRa_1.30.0.zip
* DONE (STATegRa)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'STATegRa' successfully unpacked and MD5 sums checked