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This page was generated on 2024-03-04 11:37:44 -0500 (Mon, 04 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.2 Patched (2023-11-13 r85521) -- "Eye Holes" 4692
palomino4Windows Server 2022 Datacenterx644.3.2 (2023-10-31 ucrt) -- "Eye Holes" 4445
lconwaymacOS 12.7.1 Montereyx86_644.3.2 Patched (2023-11-01 r85457) -- "Eye Holes" 4466
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1684/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RcwlPipelines 1.18.0  (landing page)
Qiang Hu
Snapshot Date: 2024-03-03 14:05:05 -0500 (Sun, 03 Mar 2024)
git_url: https://git.bioconductor.org/packages/RcwlPipelines
git_branch: RELEASE_3_18
git_last_commit: 6da9e41
git_last_commit_date: 2023-10-24 11:11:54 -0500 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

BUILD results for RcwlPipelines on lconway


To the developers/maintainers of the RcwlPipelines package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RcwlPipelines.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: RcwlPipelines
Version: 1.18.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RcwlPipelines
StartedAt: 2024-03-03 17:57:34 -0500 (Sun, 03 Mar 2024)
EndedAt: 2024-03-03 17:57:42 -0500 (Sun, 03 Mar 2024)
EllapsedTime: 7.9 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RcwlPipelines
###
##############################################################################
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* checking for file ‘RcwlPipelines/DESCRIPTION’ ... OK
* preparing ‘RcwlPipelines’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘RcwlPipelines’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
  unable to load shared object '/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/git2r/libs/git2r.so':
  dlopen(/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/git2r/libs/git2r.so, 0x0006): Library not loaded: '/usr/local/opt/libgit2/lib/libgit2.1.4.dylib'
  Referenced from: '/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/git2r/libs/git2r.so'
  Reason: tried: '/usr/local/opt/libgit2/lib/libgit2.1.4.dylib' (no such file), '/Library/Frameworks/R.framework/Resources/lib/libgit2.1.4.dylib' (no such file), '/usr/local/jdk-18.jdk/Contents/Home/lib/server/libgit2.1.4.dylib' (no such file), '/usr/local/Cellar/libgit2/1.7.1/lib/libgit2.1.4.dylib' (no such file), '/Library/Frameworks/R.framework/Resources/lib/libgit2.1.4.dylib' (no such file), '/usr/local/jdk-18.jdk/Contents/Home/lib/server/libgit2.1.4.dylib' (no such file)
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘RcwlPipelines’
* removing ‘/private/tmp/Rtmp7vUd8G/Rinst16c1935d7c5ce/RcwlPipelines’
      -----------------------------------
ERROR: package installation failed