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This page was generated on 2024-03-29 11:36:01 -0400 (Fri, 29 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4669
palomino4Windows Server 2022 Datacenterx644.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" 4404
merida1macOS 12.7.1 Montereyx86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4427
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 949/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HiCcompare 1.24.0  (landing page)
Mikhail Dozmorov
Snapshot Date: 2024-03-27 14:05:05 -0400 (Wed, 27 Mar 2024)
git_url: https://git.bioconductor.org/packages/HiCcompare
git_branch: RELEASE_3_18
git_last_commit: 07ca875
git_last_commit_date: 2023-10-24 10:58:31 -0400 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

BUILD results for HiCcompare on nebbiolo2


To the developers/maintainers of the HiCcompare package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HiCcompare.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: HiCcompare
Version: 1.24.0
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data HiCcompare
StartedAt: 2024-03-27 17:30:07 -0400 (Wed, 27 Mar 2024)
EndedAt: 2024-03-27 17:31:00 -0400 (Wed, 27 Mar 2024)
EllapsedTime: 53.4 seconds
RetCode: 0
Status:   OK  
PackageFile: HiCcompare_1.24.0.tar.gz
PackageFileSize: 3.533 MiB

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data HiCcompare
###
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* checking for file ‘HiCcompare/DESCRIPTION’ ... OK
* preparing ‘HiCcompare’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* excluding invalid files
Subdirectory 'R' contains invalid file names:
  ‘get_CNV.txt’
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘HiCcompare/data/hmec.IS.rda’ ‘HiCcompare/data/nhek.IS.rda’
* building ‘HiCcompare_1.24.0.tar.gz’