############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r Chicago -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Chicago ### ############################################################################## ############################################################################## * checking for file 'Chicago/DESCRIPTION' ... OK * preparing 'Chicago': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'Chicago.Rmd' using rmarkdown Read 4 items The magick package is required to crop "F:/biocbuild/bbs-3.19-bioc/tmpdir/RtmpgFD7Ul/Rbuild61e4255271ea/Chicago/vignettes/Chicago_files/figure-html/unnamed-chunk-8-1.png" but not available. The magick package is required to crop "F:/biocbuild/bbs-3.19-bioc/tmpdir/RtmpgFD7Ul/Rbuild61e4255271ea/Chicago/vignettes/Chicago_files/figure-html/unnamed-chunk-8-2.png" but not available. The magick package is required to crop "F:/biocbuild/bbs-3.19-bioc/tmpdir/RtmpgFD7Ul/Rbuild61e4255271ea/Chicago/vignettes/Chicago_files/figure-html/unnamed-chunk-8-3.png" but not available. The magick package is required to crop "F:/biocbuild/bbs-3.19-bioc/tmpdir/RtmpgFD7Ul/Rbuild61e4255271ea/Chicago/vignettes/Chicago_files/figure-html/unnamed-chunk-14-1.png" but not available. The magick package is required to crop "F:/biocbuild/bbs-3.19-bioc/tmpdir/RtmpgFD7Ul/Rbuild61e4255271ea/Chicago/vignettes/Chicago_files/figure-html/unnamed-chunk-16-1.png" but not available. Quitting from lines 285-289 [unnamed-chunk-19] (Chicago.Rmd) Error: processing vignette 'Chicago.Rmd' failed with diagnostics: Corrupt Cache: index file See AnnotationHub's TroubleshootingTheHubs vignette section on corrupt cache cache: F:\biocbuild\AnnotationHub_cache filename: annotationhub.index.rds --- failed re-building 'Chicago.Rmd' SUMMARY: processing the following file failed: 'Chicago.Rmd' Error: Vignette re-building failed. Execution halted