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This page was generated on 2021-11-26 15:05:14 -0500 (Fri, 26 Nov 2021).

INSTALL results for CRISPRseek on tokay2

To the developers/maintainers of the CRISPRseek package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CRISPRseek.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 416/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CRISPRseek 1.34.0  (landing page)
Lihua Julie Zhu
Snapshot Date: 2021-11-25 04:15:05 -0500 (Thu, 25 Nov 2021)
git_url: https://git.bioconductor.org/packages/CRISPRseek
git_branch: RELEASE_3_14
git_last_commit: 11159db
git_last_commit_date: 2021-10-26 12:11:02 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CRISPRseek
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CRISPRseek_1.34.0.tar.gz && rm -rf CRISPRseek.buildbin-libdir && mkdir CRISPRseek.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRISPRseek.buildbin-libdir CRISPRseek_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CRISPRseek_1.34.0.zip && rm CRISPRseek_1.34.0.tar.gz CRISPRseek_1.34.0.zip
StartedAt: 2021-11-25 09:24:50 -0500 (Thu, 25 Nov 2021)
EndedAt: 2021-11-25 09:26:38 -0500 (Thu, 25 Nov 2021)
EllapsedTime: 108.0 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CRISPRseek_1.34.0.tar.gz && rm -rf CRISPRseek.buildbin-libdir && mkdir CRISPRseek.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRISPRseek.buildbin-libdir CRISPRseek_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CRISPRseek_1.34.0.zip && rm CRISPRseek_1.34.0.tar.gz CRISPRseek_1.34.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  4 10.5M    4  524k    0     0  1286k      0  0:00:08 --:--:--  0:00:08 1286k
 28 10.5M   28 3071k    0     0  2206k      0  0:00:04  0:00:01  0:00:03 2206k
 61 10.5M   61 6639k    0     0  2784k      0  0:00:03  0:00:02  0:00:01 2784k
100 10.5M  100 10.5M    0     0  3239k      0  0:00:03  0:00:03 --:--:-- 3240k

install for i386

* installing *source* package 'CRISPRseek' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CRISPRseek'
    finding HTML links ... done
    CRISPRseek-package                      html  
    annotateOffTargets                      html  
    buildFeatureVectorForScoring            html  
    calculategRNAEfficiency                 html  
    compare2Sequences                       html  
    deepCpf1                                html  
    filterOffTarget                         html  
    filtergRNAs                             html  
    findgRNAs                               html  
    getOfftargetScore                       html  
    isPatternUnique                         html  
    offTargetAnalysis                       html  
    offTargetAnalysisWithoutBSgenome        html  
    predictRelativeFreqIndels               html  
    searchHits                              html  
    searchHits2                             html  
    translatePattern                        html  
    uniqueREs                               html  
    writeHits                               html  
    writeHits2                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CRISPRseek' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CRISPRseek' as CRISPRseek_1.34.0.zip
* DONE (CRISPRseek)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'CRISPRseek' successfully unpacked and MD5 sums checked