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BUILD BIN report for CNAnorm on tokay1

This page was generated on 2021-02-22 12:37:30 -0500 (Mon, 22 Feb 2021).

To the developers/maintainers of the CNAnorm package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 332/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNAnorm 1.36.0
Stefano Berri
Snapshot Date: 2021-02-21 14:52:07 -0500 (Sun, 21 Feb 2021)
URL: https://git.bioconductor.org/packages/CNAnorm
Branch: RELEASE_3_12
Last Commit: 9bfd2c4
Last Changed Date: 2020-10-27 10:43:06 -0500 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: CNAnorm
Version: 1.36.0
Command: rm -rf CNAnorm.buildbin-libdir && mkdir CNAnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNAnorm.buildbin-libdir CNAnorm_1.36.0.tar.gz
StartedAt: 2021-02-22 08:53:26 -0500 (Mon, 22 Feb 2021)
EndedAt: 2021-02-22 08:54:20 -0500 (Mon, 22 Feb 2021)
EllapsedTime: 53.8 seconds
RetCode: 0
Status:   OK   
PackageFile: CNAnorm_1.36.0.zip
PackageFileSize: 1.801 MiB

Command output

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###
### Running command:
###
###   rm -rf CNAnorm.buildbin-libdir && mkdir CNAnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNAnorm.buildbin-libdir CNAnorm_1.36.0.tar.gz
###
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install for i386

* installing *source* package 'CNAnorm' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c daxpy.f -o daxpy.o
"C:/rtools40/mingw32/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c ddot.f -o ddot.o
"C:/rtools40/mingw32/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dgbfa.f -o dgbfa.o
"C:/rtools40/mingw32/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dgbsl.f -o dgbsl.o
"C:/rtools40/mingw32/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dscal.f -o dscal.o
"C:/rtools40/mingw32/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dsmooth.f -o dsmooth.o
"C:/rtools40/mingw32/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c idamax.f -o idamax.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o CNAnorm.dll tmp.def daxpy.o ddot.o dgbfa.o dgbsl.o dscal.o dsmooth.o idamax.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/CNAnorm.buildbin-libdir/00LOCK-CNAnorm/00new/CNAnorm/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CNAnorm'
    finding HTML links ... done
    CN                                      html  
    CNAnorm-class                           html  
    DerivData-class                         html  
    InData-class                            html  
    LS041                                   html  
    Params-class                            html  
    addDNACopy-methods                      html  
    addSmooth-methods                       html  
    chrsAndpos-methods                      html  
    data-hg19_hs_ideogr                     html  
    dataFrame2object                        html  
    discreteNorm-methods                    html  
    exportTable-method                      html  
    gPar                                    html  
    gcNorm-methods                          html  
    peakPloidy                              html  
    plotGenome-methods                      html  
    plotPeaks-methods                       html  
    ratio-methods                           html  
    suggValid-methods                       html  
    validation-methods                      html  
    workflowWrapper                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CNAnorm' ...
** libs
"C:/rtools40/mingw64/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c daxpy.f -o daxpy.o
"C:/rtools40/mingw64/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c ddot.f -o ddot.o
"C:/rtools40/mingw64/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dgbfa.f -o dgbfa.o
"C:/rtools40/mingw64/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dgbsl.f -o dgbsl.o
"C:/rtools40/mingw64/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dscal.f -o dscal.o
"C:/rtools40/mingw64/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c dsmooth.f -o dsmooth.o
"C:/rtools40/mingw64/bin/"gfortran  -fno-optimize-sibling-calls    -O2  -mfpmath=sse -msse2 -mstackrealign -c idamax.f -o idamax.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o CNAnorm.dll tmp.def daxpy.o ddot.o dgbfa.o dgbsl.o dscal.o dsmooth.o idamax.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/CNAnorm.buildbin-libdir/CNAnorm/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNAnorm' as CNAnorm_1.36.0.zip
* DONE (CNAnorm)