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This page was generated on 2024-02-22 11:35:45 -0500 (Thu, 22 Feb 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.2 Patched (2023-11-13 r85521) -- "Eye Holes" 4691
palomino4Windows Server 2022 Datacenterx644.3.2 (2023-10-31 ucrt) -- "Eye Holes" 4444
lconwaymacOS 12.7.1 Montereyx86_644.3.2 Patched (2023-11-01 r85457) -- "Eye Holes" 4465
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 110/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AUCell 1.24.0  (landing page)
Sara Aibar
Snapshot Date: 2024-02-21 14:05:05 -0500 (Wed, 21 Feb 2024)
git_url: https://git.bioconductor.org/packages/AUCell
git_branch: RELEASE_3_18
git_last_commit: 8c22389
git_last_commit_date: 2023-10-24 10:59:42 -0500 (Tue, 24 Oct 2023)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    ERROR  
palomino4Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    ERROR    OK  
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

CHECK results for AUCell on nebbiolo2


To the developers/maintainers of the AUCell package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AUCell.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: AUCell
Version: 1.24.0
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:AUCell.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings AUCell_1.24.0.tar.gz
StartedAt: 2024-02-21 20:06:15 -0500 (Wed, 21 Feb 2024)
EndedAt: 2024-02-21 20:06:20 -0500 (Wed, 21 Feb 2024)
EllapsedTime: 5.0 seconds
RetCode: 1
Status:   ERROR  
CheckDir: AUCell.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:AUCell.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings AUCell_1.24.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/AUCell.Rcheck’
* using R version 4.3.2 Patched (2023-11-13 r85521)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
    gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
    GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.3 LTS
* using session charset: UTF-8
* checking for file ‘AUCell/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘AUCell’ version ‘1.24.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘rbokeh’

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.18-bioc/meat/AUCell.Rcheck/00check.log’
for details.


Installation output


Tests output


Example timings