Back to Workflows build report for BioC 3.19

This page was generated on 2024-02-20 14:00:11 -0500 (Tue, 20 Feb 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4657
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2024-01-14 r85805 ucrt) -- "Unsuffered Consequences" 4397
merida1macOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4424
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 29/30HostnameOS / ArchINSTALLBUILD
TCGAWorkflow 1.27.0  (landing page)
Tiago Chedraoui Silva
Snapshot Date: 2024-02-20 07:45:01 -0500 (Tue, 20 Feb 2024)
git_url: https://git.bioconductor.org/packages/TCGAWorkflow
git_branch: devel
git_last_commit: ed4c670
git_last_commit_date: 2023-10-24 08:47:14 -0500 (Tue, 24 Oct 2023)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK  
merida1macOS 12.7.1 Monterey / x86_64  OK    OK  

BUILD results for TCGAWorkflow on nebbiolo1


To the developers/maintainers of the TCGAWorkflow package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: TCGAWorkflow
Version: 1.27.0
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAWorkflow
StartedAt: 2024-02-20 08:04:26 -0500 (Tue, 20 Feb 2024)
EndedAt: 2024-02-20 08:28:45 -0500 (Tue, 20 Feb 2024)
EllapsedTime: 1459.3 seconds
RetCode: 0
Status:   OK  
PackageFile: TCGAWorkflow_1.27.0.tar.gz
PackageFileSize: 3.207 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAWorkflow
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* checking for file ‘TCGAWorkflow/DESCRIPTION’ ... OK
* preparing ‘TCGAWorkflow’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘TCGAWorkflow_1.27.0.tar.gz’