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This page was generated on 2021-10-23 14:06:51 -0400 (Sat, 23 Oct 2021).

INSTALL results for zinbwave on riesling1

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raw results

Package 2082/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
zinbwave 1.15.3  (landing page)
Davide Risso
Snapshot Date: 2021-10-22 14:50:11 -0400 (Fri, 22 Oct 2021)
git_url: https://git.bioconductor.org/packages/zinbwave
git_branch: master
git_last_commit: 712b11d
git_last_commit_date: 2021-09-21 05:41:56 -0400 (Tue, 21 Sep 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  YES

Summary

Package: zinbwave
Version: 1.15.3
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/zinbwave_1.15.3.tar.gz && rm -rf zinbwave.buildbin-libdir && mkdir zinbwave.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=zinbwave.buildbin-libdir zinbwave_1.15.3.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL zinbwave_1.15.3.zip && rm zinbwave_1.15.3.tar.gz zinbwave_1.15.3.zip
StartedAt: 2021-10-22 17:58:06 -0400 (Fri, 22 Oct 2021)
EndedAt: 2021-10-22 18:01:21 -0400 (Fri, 22 Oct 2021)
EllapsedTime: 194.8 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/zinbwave_1.15.3.tar.gz && rm -rf zinbwave.buildbin-libdir && mkdir zinbwave.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=zinbwave.buildbin-libdir zinbwave_1.15.3.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL zinbwave_1.15.3.zip && rm zinbwave_1.15.3.tar.gz zinbwave_1.15.3.zip
###
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install for i386

* installing *source* package 'zinbwave' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'zinbwave'
    finding HTML links ... done
    ZinbModel-class                         html  
    computeDevianceResiduals                html  
    computeObservationalWeights             html  
    getAlpha_mu                             html  
    getAlpha_pi                             html  
    getBeta_mu                              html  
    getBeta_pi                              html  
    getEpsilon_W                            html  
    getEpsilon_alpha                        html  
    getEpsilon_beta_mu                      html  
    getEpsilon_beta_pi                      html  
    getEpsilon_gamma_mu                     html  
    getEpsilon_gamma_pi                     html  
    getEpsilon_zeta                         html  
    getGamma_mu                             html  
    getGamma_pi                             html  
    getLogMu                                html  
    getLogitPi                              html  
    getMu                                   html  
    getPhi                                  html  
    getPi                                   html  
    getTheta                                html  
    getV_mu                                 html  
    getV_pi                                 html  
    getW                                    html  
    getX_mu                                 html  
    getX_pi                                 html  
    getZeta                                 html  
    glmWeightedF                            html  
    imputeZeros                             html  
    independentFiltering                    html  
    loglik                                  html  
    nFactors                                html  
    nFeatures                               html  
    nParams                                 html  
    nSamples                                html  
    orthogonalizeTraceNorm                  html  
    penalty                                 html  
    pvalueAdjustment                        html  
    solveRidgeRegression                    html  
    toydata                                 html  
    zinb.loglik                             html  
    zinb.loglik.dispersion                  html  
    zinb.loglik.dispersion.gradient         html  
    zinb.loglik.matrix                      html  
    zinb.loglik.regression                  html  
    zinb.loglik.regression.gradient         html  
    zinb.regression.parseModel              html  
    zinbAIC                                 html  
    zinbFit                                 html  
    zinbInitialize                          html  
    zinbModel                               html  
REDIRECT:topic	 Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.14-bioc/meat/zinbwave.buildbin-libdir/00LOCK-zinbwave/00new/zinbwave/help/zinbModel.html
    zinbOptimize                            html  
    zinbOptimizeDispersion                  html  
    zinbSim                                 html  
    zinbsurf                                html  
    zinbwave                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'zinbwave' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'zinbwave' as zinbwave_1.15.3.zip
* DONE (zinbwave)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'zinbwave' successfully unpacked and MD5 sums checked