############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data xcms ### ############################################################################## ############################################################################## * checking for file ‘xcms/DESCRIPTION’ ... OK * preparing ‘xcms’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘LC-MS-feature-grouping.Rmd’ using rmarkdown Quitting from lines 70-76 [load-data] (LC-MS-feature-grouping.Rmd) Error: processing vignette 'LC-MS-feature-grouping.Rmd' failed with diagnostics: there is no package called 'faahKO' --- failed re-building ‘LC-MS-feature-grouping.Rmd’ --- re-building ‘xcms-direct-injection.Rmd’ using rmarkdown 2024-05-15 23:44:41.911 R[68631:1548326707] XType: com.apple.fonts is not accessible. 2024-05-15 23:44:41.912 R[68631:1548326707] XType: XTFontStaticRegistry is enabled. --- finished re-building ‘xcms-direct-injection.Rmd’ --- re-building ‘xcms-lcms-ms.Rmd’ using rmarkdown --- finished re-building ‘xcms-lcms-ms.Rmd’ --- re-building ‘xcms.Rmd’ using rmarkdown Quitting from lines 30-37 [init] (xcms.Rmd) Error: processing vignette 'xcms.Rmd' failed with diagnostics: there is no package called 'faahKO' --- failed re-building ‘xcms.Rmd’ SUMMARY: processing the following files failed: ‘LC-MS-feature-grouping.Rmd’ ‘xcms.Rmd’ Error: Vignette re-building failed. Execution halted