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This page was generated on 2021-10-22 12:04:16 -0400 (Fri, 22 Oct 2021).

INSTALL results for tweeDEseq on nebbiolo2

To the developers/maintainers of the tweeDEseq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/tweeDEseq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2011/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
tweeDEseq 1.39.0  (landing page)
Juan R Gonzalez
Snapshot Date: 2021-10-21 14:50:08 -0400 (Thu, 21 Oct 2021)
git_url: https://git.bioconductor.org/packages/tweeDEseq
git_branch: master
git_last_commit: 5da02fe
git_last_commit_date: 2021-05-19 11:50:43 -0400 (Wed, 19 May 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    NA  

Summary

Package: tweeDEseq
Version: 1.39.0
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL tweeDEseq
StartedAt: 2021-10-21 16:10:02 -0400 (Thu, 21 Oct 2021)
EndedAt: 2021-10-21 16:10:08 -0400 (Thu, 21 Oct 2021)
EllapsedTime: 6.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL tweeDEseq
###
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* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘tweeDEseq’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c cov_wt_C.c -o cov_wt_C.o
cov_wt_C.c: In function ‘cov_wt_C’:
cov_wt_C.c:79:14: warning: ‘wvar’ may be used uninitialized in this function [-Wmaybe-uninitialized]
   79 |   free(aux), free(wvar), free(y);
      |              ^~~~~~~~~~
cov_wt_C.c: In function ‘momentEstimates_wt_C’:
cov_wt_C.c:154:12: warning: ‘moments’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |   free(y), free(moments), free(aux);
      |            ^~~~~~~~~~~~~
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c init_tweeDEseq.c -o init_tweeDEseq.o
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c loglikGlm.c -o loglikGlm.o
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c logprobs.c -o logprobs.o
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c permtest.c -o permtest.o
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c probs.c -o probs.o
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c zhu2.c -o zhu2.o
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c zhu3.c -o zhu3.o
gcc -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o tweeDEseq.so cov_wt_C.o init_tweeDEseq.o loglikGlm.o logprobs.o permtest.o probs.o zhu2.o zhu3.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-tweeDEseq/00new/tweeDEseq/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tweeDEseq)