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### Running command:
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###   chmod a+r scPipe -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data scPipe
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* checking for file 'scPipe/DESCRIPTION' ... OK
* preparing 'scPipe':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'scPipe' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.2.0'
using C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
using C++11
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.19-bioc/R/library/zlibbioc/include" -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rhtslib/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/zlibbioc/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/testthat/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c FragmentThread.cpp -o FragmentThread.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.19-bioc/R/library/zlibbioc/include" -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rhtslib/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/zlibbioc/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/testthat/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c FragmentUtils.cpp -o FragmentUtils.o
In file included from FragmentUtils.cpp:1:
Fragments.h:42:9: error: 'int32_t' does not name a type
   42 |         int32_t start;                                  // 1
      |         ^~~~~~~
Fragments.h:39:1: note: 'int32_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
   38 | #include <map>
  +++ |+#include <cstdint>
   39 | 
Fragments.h:43:9: error: 'int32_t' does not name a type
   43 |         int32_t end;                                    // 2
      |         ^~~~~~~
Fragments.h:43:9: note: 'int32_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
FragmentUtils.cpp: In function 'std::string FragToString(FragmentStruct, bool, bool, bool, bool)':
FragmentUtils.cpp:13:49: error: 'struct FragmentStruct' has no member named 'start'
   13 |                 << (start ? std::to_string(frag.start) : "")
      |                                                 ^~~~~
FragmentUtils.cpp:15:47: error: 'struct FragmentStruct' has no member named 'end'
   15 |                 << (end ? std::to_string(frag.end) : "")
      |                                               ^~~
FragmentUtils.cpp: In function 'FragmentStruct StringToFrag(std::string)':
FragmentUtils.cpp:45:9: error: could not convert '{chrom, start, end, s, true, 0}' from '<brace-enclosed initializer list>' to 'FragmentStruct'
   45 |         };
      |         ^
      |         |
      |         <brace-enclosed initializer list>
make: *** [Makevars.win:20: FragmentUtils.o] Error 1
ERROR: compilation failed for package 'scPipe'
* removing 'F:/biocbuild/bbs-3.19-bioc/tmpdir/RtmpGSkp7G/Rinst2e6854ba5c09/scPipe'
      -----------------------------------
ERROR: package installation failed