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This page was generated on 2024-03-28 11:37:03 -0400 (Thu, 28 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences" 4708
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2024-03-16 r86144 ucrt) -- "Unsuffered Consequences" 4446
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences" 4471
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-03-19 r86153) -- "Unsuffered Consequences" 4426
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1878/2270HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scMerge 1.19.0  (landing page)
Yingxin Lin
Snapshot Date: 2024-03-27 14:00:18 -0400 (Wed, 27 Mar 2024)
git_url: https://git.bioconductor.org/packages/scMerge
git_branch: devel
git_last_commit: e5feace
git_last_commit_date: 2023-10-24 11:13:27 -0400 (Tue, 24 Oct 2023)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

BUILD results for scMerge on nebbiolo1


To the developers/maintainers of the scMerge package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scMerge.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: scMerge
Version: 1.19.0
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data scMerge
StartedAt: 2024-03-27 19:20:18 -0400 (Wed, 27 Mar 2024)
EndedAt: 2024-03-27 19:21:32 -0400 (Wed, 27 Mar 2024)
EllapsedTime: 74.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data scMerge
###
##############################################################################
##############################################################################


* checking for file ‘scMerge/DESCRIPTION’ ... OK
* preparing ‘scMerge’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘scMerge.Rmd’ using rmarkdown
--- finished re-building ‘scMerge.Rmd’

--- re-building ‘scMerge2.Rmd’ using rmarkdown

Quitting from lines 82-92 [unnamed-chunk-2] (scMerge2.Rmd)
Error: processing vignette 'scMerge2.Rmd' failed with diagnostics:
when the right operand is not a DelayedArray object (or derivative),
  its length (209400) cannot be greater than the first dimension of the
  left operand (200)
--- failed re-building ‘scMerge2.Rmd’

SUMMARY: processing the following file failed:
  ‘scMerge2.Rmd’

Error: Vignette re-building failed.
Execution halted