############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data scAnnotatR ### ############################################################################## ############################################################################## * checking for file ‘scAnnotatR/DESCRIPTION’ ... OK * preparing ‘scAnnotatR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘classifying-cells.Rmd’ using rmarkdown Quitting from lines 75-76 [unnamed-chunk-4] (classifying-cells.Rmd) Error: processing vignette 'classifying-cells.Rmd' failed with diagnostics: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment --- failed re-building ‘classifying-cells.Rmd’ --- re-building ‘training-basic-model.Rmd’ using rmarkdown --- finished re-building ‘training-basic-model.Rmd’ --- re-building ‘training-child-model.Rmd’ using rmarkdown Quitting from lines 63-66 [unnamed-chunk-3] (training-child-model.Rmd) Error: processing vignette 'training-child-model.Rmd' failed with diagnostics: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment --- failed re-building ‘training-child-model.Rmd’ SUMMARY: processing the following files failed: ‘classifying-cells.Rmd’ ‘training-child-model.Rmd’ Error: Vignette re-building failed. Execution halted