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This page was generated on 2024-03-04 11:38:27 -0500 (Mon, 04 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4676
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2024-01-14 r85805 ucrt) -- "Unsuffered Consequences" 4414
merida1macOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4441
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-01-16 r85812) -- "Unsuffered Consequences" 4417
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1723/2251HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rGREAT 2.5.3  (landing page)
Zuguang Gu
Snapshot Date: 2024-03-01 14:00:22 -0500 (Fri, 01 Mar 2024)
git_url: https://git.bioconductor.org/packages/rGREAT
git_branch: devel
git_last_commit: a8b2403
git_last_commit_date: 2024-02-05 08:42:06 -0500 (Mon, 05 Feb 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  ERROR    OK    ERROR  
palomino3Windows Server 2022 Datacenter / x64  ERROR    OK    ERROR    OK  
merida1macOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  ERROR    OK    ERROR  

BUILD BIN results for rGREAT on palomino3


To the developers/maintainers of the rGREAT package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rGREAT.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: rGREAT
Version: 2.5.3
Command: rm -rf rGREAT.buildbin-libdir && mkdir rGREAT.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=rGREAT.buildbin-libdir rGREAT_2.5.3.tar.gz
StartedAt: 2024-03-02 10:37:29 -0500 (Sat, 02 Mar 2024)
EndedAt: 2024-03-02 10:38:46 -0500 (Sat, 02 Mar 2024)
EllapsedTime: 77.5 seconds
RetCode: 0
Status:   OK  
PackageFile: rGREAT_2.5.3.zip
PackageFileSize: 5.271 MiB

Command output

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### Running command:
###
###   rm -rf rGREAT.buildbin-libdir && mkdir rGREAT.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=rGREAT.buildbin-libdir rGREAT_2.5.3.tar.gz
###
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* installing *source* package 'rGREAT' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.3.0'
g++ -std=gnu++17  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include'   -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include'   -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c reduce_by_start_and_end.cpp -o reduce_by_start_and_end.o
g++ -std=gnu++17 -shared -s -static-libgcc -o rGREAT.dll tmp.def RcppExports.o reduce_by_start_and_end.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.19-bioc/meat/rGREAT.buildbin-libdir/00LOCK-rGREAT/00new/rGREAT/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'rGREAT' as rGREAT_2.5.3.zip
* DONE (rGREAT)