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This page was generated on 2022-01-27 11:07:46 -0500 (Thu, 27 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4167
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4062
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4004
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4121
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for proActiv on riesling1


To the developers/maintainers of the proActiv package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/proActiv.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1453/2077HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
proActiv 1.5.0  (landing page)
Joseph Lee
Snapshot Date: 2022-01-26 13:55:18 -0500 (Wed, 26 Jan 2022)
git_url: https://git.bioconductor.org/packages/proActiv
git_branch: master
git_last_commit: e9e7e25
git_last_commit_date: 2021-10-26 13:02:38 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    NA  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'AnnotationDbi' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: proActiv
Version: 1.5.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL proActiv
StartedAt: 2022-01-26 16:02:15 -0500 (Wed, 26 Jan 2022)
EndedAt: 2022-01-26 16:03:27 -0500 (Wed, 26 Jan 2022)
EllapsedTime: 72.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL proActiv
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'proActiv' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'proActiv'
    finding HTML links ... done
    PromoterAnnotation-class                html  
    boxplotPromoters                        html  
    calculateJunctionReadCounts             html  
    calculatePromoterReadCounts             html  
    getAbsolutePromoterActivity             html  
    getAlternativePromoters                 html  
    getGeneExpression                       html  
    getRelativePromoterActivity             html  
    integrateProactiv                       html  
    normalizePromoterReadCounts             html  
    plotHeatmap                             html  
    plotPCA                                 html  
    preparePromoterAnnotation               html  
    proActiv                                html  
    promoterAnnotation.gencode.v34.subset   html  
    reexports                               html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (proActiv)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'IMAS' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'rgsepd' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'TAPseq' is missing or broken
 done