Back to Multiple platform build/check report for BioC 3.17:   simplified   long
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

This page was generated on 2023-02-07 11:06:14 -0500 (Tue, 07 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.1 LTS)x86_64R Under development (unstable) (2023-01-10 r83596) -- "Unsuffered Consequences" 4483
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2023-01-10 r83596 ucrt) -- "Unsuffered Consequences" 4249
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2023-01-10 r83596) -- "Unsuffered Consequences" 4272
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for phenopath on palomino3


To the developers/maintainers of the phenopath package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/phenopath.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1462/2164HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phenopath 1.23.0  (landing page)
Kieran Campbell
Snapshot Date: 2023-02-06 14:00:21 -0500 (Mon, 06 Feb 2023)
git_url: https://git.bioconductor.org/packages/phenopath
git_branch: master
git_last_commit: bd532b7
git_last_commit_date: 2022-11-01 11:15:55 -0500 (Tue, 01 Nov 2022)
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: phenopath
Version: 1.23.0
Command: rm -rf phenopath.buildbin-libdir && mkdir phenopath.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=phenopath.buildbin-libdir phenopath_1.23.0.tar.gz
StartedAt: 2023-02-07 08:49:33 -0500 (Tue, 07 Feb 2023)
EndedAt: 2023-02-07 08:50:15 -0500 (Tue, 07 Feb 2023)
EllapsedTime: 41.3 seconds
RetCode: 0
Status:   OK  
PackageFile: phenopath_1.23.0.zip
PackageFileSize: 1.132 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf phenopath.buildbin-libdir && mkdir phenopath.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=phenopath.buildbin-libdir phenopath_1.23.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'phenopath' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 12.2.0'
g++ -std=gnu++14  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++14  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/Rcpp/include'   -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c cavi.cpp -o cavi.o
g++ -std=gnu++14 -shared -s -static-libgcc -o phenopath.dll tmp.def RcppExports.o cavi.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc/meat/phenopath.buildbin-libdir/00LOCK-phenopath/00new/phenopath/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'phenopath' as phenopath_1.23.0.zip
* DONE (phenopath)