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This page was generated on 2022-01-28 11:08:30 -0500 (Fri, 28 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4167
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4062
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4004
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4121
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for phantasus on riesling1


To the developers/maintainers of the phantasus package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/phantasus.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1400/2077HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phantasus 1.15.2  (landing page)
Alexey Sergushichev
Snapshot Date: 2022-01-27 13:55:17 -0500 (Thu, 27 Jan 2022)
git_url: https://git.bioconductor.org/packages/phantasus
git_branch: master
git_last_commit: 5bcaa19
git_last_commit_date: 2021-11-13 13:46:20 -0500 (Sat, 13 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'Biobase' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  NO, package depends on 'fgsea' which is not available

Summary

Package: phantasus
Version: 1.15.2
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL phantasus
StartedAt: 2022-01-27 15:55:51 -0500 (Thu, 27 Jan 2022)
EndedAt: 2022-01-27 15:56:57 -0500 (Thu, 27 Jan 2022)
EllapsedTime: 66.1 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL phantasus
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'phantasus' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'phantasus'
    finding HTML links ... done
    adjustDataset                           html  
    annotationDBMeta                        html  
    calcPCA                                 html  
    calculatedAnnotation                    html  
    checkGPLsFallback                       html  
    colMeansByGroups                        html  
    collapseDataset                         html  
    convertByAnnotationDB                   html  
    createES                                html  
    es                                      html  
    fgseaExample                            html  
    generatePreloadedSession                html  
    getArchs4Files                          html  
    getES                                   html  
    getGDS                                  html  
    getGSE                                  html  
    gseaPlot                                html  
    limmaAnalysis                           html  
    loadFromARCHS4                          html  
    loadGEO                                 html  
    loadPreloaded                           html  
    performKmeans                           html  
    queryAnnotationDBMeta                   html  
    read.gct                                html  
    reparseCachedESs                        html  
    reproduceInR                            html  
    servePhantasus                          html  
    shinyGAMAnalysis                        html  
    subsetES                                html  
    write.gct                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (phantasus)
Making 'packages.html' ... done