############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r paxtoolsr -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data paxtoolsr ### ############################################################################## ############################################################################## * checking for file 'paxtoolsr/DESCRIPTION' ... OK * preparing 'paxtoolsr': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'using_paxtoolsr.Rmd' using rmarkdown 2024-06-09 21:07:11,578 1299 [main] INFO org.biopax.paxtools.PaxtoolsMain - toSif: not blacklisting ubiquitous molecules (no blacklist.txt found) 2024-06-09 21:07:12,658 2379 [main] INFO org.biopax.paxtools.PaxtoolsMain - toSifnx: not blacklisting ubiquitous molecules (no blacklist.txt found) Quitting from lines 169-171 [searchResultsExampleVerbose] (using_paxtoolsr.Rmd) Error: processing vignette 'using_paxtoolsr.Rmd' failed with diagnostics: ERROR: Code: 404 Message: Unknown Error (PC Webservice Error) --- failed re-building 'using_paxtoolsr.Rmd' SUMMARY: processing the following file failed: 'using_paxtoolsr.Rmd' Error: Vignette re-building failed. Execution halted