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This page was generated on 2022-06-30 11:06:43 -0400 (Thu, 30 Jun 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" 4343
palomino4Windows Server 2022 Datacenterx644.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" 4147
lconwaymacOS 12.2.1 Montereyx86_644.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" 4159
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for makecdfenv on palomino4


To the developers/maintainers of the makecdfenv package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/makecdfenv.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1059/2124HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
makecdfenv 1.73.0  (landing page)
James W. MacDonald
Snapshot Date: 2022-06-29 14:00:05 -0400 (Wed, 29 Jun 2022)
git_url: https://git.bioconductor.org/packages/makecdfenv
git_branch: master
git_last_commit: d9e7e85
git_last_commit_date: 2022-04-26 10:54:49 -0400 (Tue, 26 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.2.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: makecdfenv
Version: 1.73.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.16/bioc/src/contrib/makecdfenv_1.73.0.tar.gz && rm -rf makecdfenv.buildbin-libdir && mkdir makecdfenv.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=makecdfenv.buildbin-libdir makecdfenv_1.73.0.tar.gz && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL makecdfenv_1.73.0.zip && rm makecdfenv_1.73.0.tar.gz makecdfenv_1.73.0.zip
StartedAt: 2022-06-29 15:34:45 -0400 (Wed, 29 Jun 2022)
EndedAt: 2022-06-29 15:35:03 -0400 (Wed, 29 Jun 2022)
EllapsedTime: 17.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.16/bioc/src/contrib/makecdfenv_1.73.0.tar.gz && rm -rf makecdfenv.buildbin-libdir && mkdir makecdfenv.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=makecdfenv.buildbin-libdir makecdfenv_1.73.0.tar.gz && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL makecdfenv_1.73.0.zip && rm makecdfenv_1.73.0.tar.gz makecdfenv_1.73.0.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 78 3075k   78 2410k    0     0  5927k      0 --:--:-- --:--:-- --:--:-- 5922k
100 3075k  100 3075k    0     0  6291k      0 --:--:-- --:--:-- --:--:-- 6288k
only one architecture so ignoring '--merge-multiarch'
* installing *source* package 'makecdfenv' ...
** using staged installation

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
gcc  -I"F:/biocbuild/bbs-3.16-bioc/R/library/zlibbioc/include" -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -DHAVE_ZLIB    -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c read_cdffile.c -o read_cdffile.o
read_cdffile.c: In function 'readQC':
read_cdffile.c:576:7: warning: variable 'typeQC' set but not used [-Wunused-but-set-variable]
  576 |   int typeQC;
      |       ^~~~~~
gcc -shared -s -static-libgcc -o makecdfenv.dll tmp.def read_cdffile.o -LF:/biocbuild/bbs-3.16-bioc/R/library/zlibbioc/libs/x64 -lzlib1bioc -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.16-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.16-bioc/meat/makecdfenv.buildbin-libdir/00LOCK-makecdfenv/00new/makecdfenv/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'makecdfenv' as makecdfenv_1.73.0.zip
* DONE (makecdfenv)
* installing to library 'F:/biocbuild/bbs-3.16-bioc/R/library'
package 'makecdfenv' successfully unpacked and MD5 sums checked