Multiple platform build/check report for BioC 3.17 - BUILD results for mAPKL on nebbiolo1

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This page was generated on 2023-03-24 11:05:21 -0400 (Fri, 24 Mar 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.1 LTS)	x86_64	R Under development (unstable) (2023-03-16 r83996) -- "Unsuffered Consequences"	4546
palomino3	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2023-03-15 r83984 ucrt) -- "Unsuffered Consequences"	4307
merida1	macOS 10.14.6 Mojave	x86_64	R Under development (unstable) (2023-03-16 r83985) -- "Unsuffered Consequences"	4299
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for mAPKL on nebbiolo1

To the developers/maintainers of the mAPKL package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mAPKL.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

mAPKL 1.29.0 (landing page)
Argiris Sakellariou

Snapshot Date: 2023-03-23 14:00:15 -0400 (Thu, 23 Mar 2023)

git_url: https://git.bioconductor.org/packages/mAPKL

git_branch: devel

git_last_commit: 96f181e

git_last_commit_date: 2022-11-01 11:10:59 -0400 (Tue, 01 Nov 2022)

nebbiolo1

Linux (Ubuntu 22.04.1 LTS) / x86_64

ERROR

skipped

palomino3

Windows Server 2022 Datacenter / x64

ERROR

skipped

merida1

macOS 10.14.6 Mojave / x86_64

ERROR

skipped

Summary

Package: mAPKL

Version: 1.29.0

Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data mAPKL

StartedAt: 2023-03-23 16:57:38 -0400 (Thu, 23 Mar 2023)

EndedAt: 2023-03-23 16:58:05 -0400 (Thu, 23 Mar 2023)

EllapsedTime: 27.1 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data mAPKL
###
##############################################################################
##############################################################################


* checking for file ‘mAPKL/DESCRIPTION’ ... OK
* preparing ‘mAPKL’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘mAPKL.Rnw’ using knitr
Quitting from lines 87-92 (mAPKL.Rnw) 
Error: processing vignette 'mAPKL.Rnw' failed with diagnostics:
cannot xtfrm data frames
--- failed re-building ‘mAPKL.Rnw’

SUMMARY: processing the following file failed:
  ‘mAPKL.Rnw’

Error: Vignette re-building failed.
Execution halted